Training in Bioinformatics|Training in Bioinformatics in Lucknow- cytogene.in
Applications invited for final year Project/Dissertation of B.Sc, M.Sc, B.Tech & M.Tech Students of Life Sciences. For further details please Call us on 8756658021 or 05222355989. Cytogene Research & Development is now Offering Mini- Project of (One and Half Month) 40-45 Days,that will include a complete short term Project.

Bioinformatics is an interdisciplinary field that develops and improves on methods for storing, retrieving, organizing and analyzing biological data. A major activity in bioinformatics is to develop software tools to generate useful biological knowledge. Bioinformatics uses many areas of computer science, mathematics and engineering to process biological data. Complex machines are used to read in biological data at a much faster rate than before. Databases and information systems are used to store and organize biological data. Analyzing biological data may involve algorithms in artificial intelligence, soft computing, data mining, image processing, and simulation. In CytoGene, we offer several modules of training as well as dissertation/project in Bioinformatics. The duration of the programs offered for training ranges from 15 to 30 days and for project ranges from 3-6 months. Modules are selected by the students on their choice.

TRAINING

Advace Bioinformatics


Duration- 30 Days ;                                                                                                       Fee- Rs. 6500/-

General Laboratory Practices.
Introduction to Bioinformatics (Basic & Application).
Demonstration of Instruments.
Chemical calculation & Reagent Preparation.
Basic Bioinformatics
Introduction to NCBI..
Study of various file formats.
Sequence retrieval from databases.
Alignment of sequences using BLAST.
Extraction of Lipid.
Primer designing for a given sequence.
Pattern searching for protein.
Protein localization.
Sequence retrieval Tools
Gene sequence retrieval from nucleotide databases.
Protein sequence retrieval from protein databases.
Retrieval of Mass Spectrometry/2D Gel Electrophoresis data using web database.
Retrieval of PTMs in a protein using ExPasy server.
Retrieval of Microarray data from different databases.
Retrieval of pathways of different biochemical processes.
Structure Visualization Tools
Visualization of 3-D structure of proteins using various tools.
Secondary structure visualization using different tools.
Visualization of Potein-ligand interaction.
Visualization of Potein-Protein interaction.
Ramachandran Plot Analysis.
RNA structure visualization.
Comparative tools
Sequence retrieval from databases.
Pairwise alignment using EMBOSS.
Multiple Sequence Alignment using various tools.
Phylogeny and Cladogram Analysis.
Complete genome comparison.
Analysis of percentage divergence between species.
Prediction tools
Gene prediction tools.
Secondary structure prediction tool.
Structure to function prediction tool.
Ligand property prediction tool.
Toxicity and ADME properties prediction tool.
ORF finding tool.
Prediction of potential cleavage sites by ExPasy web tool.
Peptide mass prediction.
Protein family prediction <m></m></p

BASIC Bioinformatics

Duration- 15 Days ;                                                                                                       Fee- Rs. 4000/-

General Laboratory Practices.
Introduction to Bioinformatics (Basic & Application).
Demonstration of Instruments.
Chemical calculation & Reagent Preparation.

Introduction to NCBI.

Study of various file formats.
Alignment of sequences using BLAST.
Primer designing for a given sequence.
Gene sequence retrieval from nucleotide databases.
Protein sequence retrieval from protein databases.
Retrieval of pathways of different biochemical processes.
Visualization of 3-D structure of proteins using various tools.
Secondary structure visualization using different tools.
Visualization of Potein-ligand interaction.
Sequence retrieval from databases.
Pairwise alignment using EMBOSS.
Multiple Sequence Alignment using various tools.
Gene prediction tools.
Secondary structure prediction tool.
Structure to function prediction tool.
Toxicity and ADME properties prediction tool.
ORF finding tool.

Drug Designing

Duration- 30 Days ;                                                                                                       Fee- Rs. 6500/-

General Laboratory Practices
Introduction to drug designing  (Basic & Application)
Demonstration of Instruments
Chemical calculation & Reagent Preparation
Literature Review
Literature study of the disease
Selection of target protein / gene
Literature study of selected gene/protein
Study of pathogenic involved in the disease
Target Identification
Retrieval of target protein using  UniProt
Nature of the target
Subcellular localization prediction
Position of protein pathways analysis
Protein functional family classification
Secondary structure prediction
Template Identification & Lead Optimization
Identification of the template using NCBI-BLAT
Retrieval of ligand/lead molecules for template
Molecule modeling of template hyphen ligand
Validation of the model
Property Prediction for Ligand
Retrieval of 3D ligand structure using RCSB-PDB
Property checking using OSIRIS
ADME property check for ligand
Analysis of Lipinski’s rule of 5
Conversion of ligand structure in different file, formats using OPEN-BABEL
Active Site Prediction
3D structure generation or prediction
Ramachandran plot analysis
Binding of target protein with ligand
Solubility and toxicity of drug
Docking  of protein & ligand
Binding energy analysis
Structure analysis of drug molecule

Project/ Dissertation

We offer four different categories of Project/dissertation work depending upon the duration of the project.

Duration: 45 Days; Fee: Rs. 9,000 – 10,000

Duration: 60 Days; Fee: Rs. 12,000- 13,000

Duration: 3 months; Fee: Rs. 15,000 – Rs. 16,000

Duration: 4 months; Fee: Rs. 18,000- Rs. 19,000

Duration 6 months; Fee: Rs. 24,000- Rs, 25,000

A varied range of project/dissertation topics are offered in this division which features major techniques of Bioinformatics viz:

Primer Designing
Alignment
Multiple Sequence Alignment
Phylogeny Analysis
Cladogram Analysis
Docking
Usage of various tools and software's in Drug Designing
3D Structure generation
Toxicity testing of ligands

And Many More..........

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